请问Bio::EnsEMBL::Registry模块怎么安装？

bmechuangye

我的系统为Fedora，用yum已安装了perl-bioperl-1.5.2_102-13.fc10.noarch，但程序里用到“use Bio::EnsEMBL::Registry;”，一运行就停在这一行报错“BEGIN failed--compilation aborted at .......”。
请问还应怎么添加这个模块: Bio::EnsEMBL::Registry.
请大家相助，非常感谢！

小小磊

试试perl -MCPAN -e 'install "Bio::EnsEMBL::Registry"'

bmechuangye

perl -MCPAN -e 'install "Bio::EnsEMBL::Registry"',也不行呀，怎么办呢？请多指点

1. 
   
2. [root@localhost x]# perl -MCPAN -e 'install "Bio::EnsEMBL::Registry"'
   
3. CPAN: Storable loaded ok (v2.18)                                          
   
4. Going to read '/root/.cpan/Metadata'                                      
   
5.   Database was generated on Mon, 22 Jun 2009 17:26:57 GMT                 
   
6. CPAN: LWP::UserAgent loaded ok (v5.823)                                   
   
7. CPAN: Time::HiRes loaded ok (v1.9719)                                    
   
8. 
   
9. I would like to connect to one of the following sites to get 'authors/01mailrc.txt.gz':                                                                       
   
10. 
    
11. [url]http://www.perl.org/CPAN/[/url]
    
12. [url]ftp://ftp.perl.org/pub/CPAN/[/url]
    
13. 
    
14. Is it OK to try to connect to the Internet? [yes]
    
15. Fetching with LWP:
    
16.   [url]http://www.perl.org/CPAN/authors/01mailrc.txt.gz[/url]
    
17. CPAN: YAML loaded ok (v0.68)
    
18. Going to read '/root/.cpan/sources/authors/01mailrc.txt.gz'
    
19. Going to read 28 yaml files from /root/.cpan/build/
    
20. ............................................................................DONE
    
21. Restored the state of 28 (in 0.5329 secs)
    
22. ............................................................................DONE
    
23. Fetching with LWP:
    
24.   [url]http://www.perl.org/CPAN/modules/02packages.details.txt.gz[/url]
    
25. Going to read '/root/.cpan/sources/modules/02packages.details.txt.gz'
    
26.   Database was generated on Mon, 22 Jun 2009 17:26:57 GMT
    
27. ............................................................................DONE
    
28. Fetching with LWP:
    
29.   [url]http://www.perl.org/CPAN/modules/03modlist.data.gz[/url]
    
30. Going to read '/root/.cpan/sources/modules/03modlist.data.gz'
    
31. ............................................................................DONE
    
32. Going to write /root/.cpan/Metadata
    
33. Warning: Cannot install Bio::EnsEMBL::Registry, don't know what it is.
    
34. Try the command
    
35. 
    
36.     i /Bio::EnsEMBL::Registry/
    
37. 
    
38. to find objects with matching identifiers.
    

复制代码

[ 本帖最后由 bmechuangye 于 2009-6-24 17:31 编辑 ]

MMMIX

原帖由 bmechuangye 于 2009-6-24 17:26 发表
Going to write /root/.cpan/Metadata
Warning: Cannot install Bio::EnsEMBL::Registry, don't know what it is.

CPAN 上根本搜不到这个模块，这不会是你们自己写的吧？或者你你用的脚本的作者自己写的？

yashiro_lj

CPAN上没有这个模块，请确认一下你要安装的模块名称吧

bmechuangye

又装了 BioPerl-run-1.6.1.tar.gz和 bioperl-run-1.4.tar.gz，还是不行，请高手相助！！

MMMIX

原帖由 yashiro_lj 于 2009-6-24 17:43 发表
CPAN上没有这个模块，请确认一下你要安装的模块名称吧

模块名称没有问题，这是 Ensembl 的模块，根本不在 CPAN 上。