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perl Bio

What is bioperl? A collection of perl modules for processing data for the life sciences A project made up of biologists, bioinformaticians, computer scientists An open source toolkit of building blocks for life sciences applications Supported by Open bioinformatics Foundation (O|B|F), http://www.open-bio.org/ Collaborative online community Current version 1.2.1, v 1.4 to be released at ...

by Pacific Yan - Perl - 2003-07-26 02:18:45 阅读(1276) 回复(0)

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http://www.people.virginia.edu/~wrp/bioch508/perl_1.pdf http://www.people.virginia.edu/~wrp/bioch508/perl_2.pdf http://www.people.virginia.edu/~wrp/bioch508/perl_3.pdf http://www.people.virginia.edu/~wrp/bioch508/perl_4.pdf http://www.people.virginia.edu/~wrp/bioch508/perl_5.pdf

by Pacific Yan - Perl - 2003-07-23 18:41:08 阅读(1511) 回复(1)

看了LKM,了解到: 每一次块I/O请求都通过一个 bio结构体表示。每个请求包含一个或多个块,这些块存储在bio_vec结构数组中,bio_vec结构如下: struct bio_vec{ /* 指向这个缓冲区所驻留的物理页*/ struct page *bv_page; /* 这个缓冲区以字节为单位的大小*/ unsigned int bv_len; /* 缓冲区所驻留的页中以字节为单位的偏移量*/ unsigned int bv_offset; }; 那么我可以通过什么方式取...

by weily0000 - 存储备份 - 2009-02-07 17:14:36 阅读(1811) 回复(2)

#include "openssl/ssl.h" #include "openssl/bio.h" #include "openssl/err.h" 包含了这几个头文件,但什么 `bio_write' bio_read等所有和这些相关的函数都 undefined reference to *****呢? 是不是编译的时候还要加些什么

by greatho1507 - C/C++ - 2008-09-11 14:47:31 阅读(1561) 回复(8)

我申请一个线程,调用bio_free, 每次都会出现core dump,查看core 文件,每次都是: #0 0x0f9a5088 in main_arena () #1 0x0fa602a4 in file_ctrl () #2 0x10015054 in dtls_clean () #3 0x1001560c in dtls_thread () #4 0x0fe04f48 in pthread_start_thread () #5 0x0f9316f8 in clone () 我的代码如下: // free the dgram bio if (para.dtls.SslbioPtr != NULL){ 《==每次释放地址和申请的地址是相同的...

by godguy - C/C++ - 2007-11-11 00:58:47 阅读(2039) 回复(1)

学习python进行中! biopython biopython bio.PDB module FAQ 1,Focuses on working with crystal structure biological macromolecules. 2,Well tested. Nearly 5500 structures from PDB—all seemed to be parsed correctly 3,Really fast! 4,Not directly supported for molecular graphics. But there are quite a few python-based solutions. You can use Pymol or BTW. http://pymol.sourceforge.net 5,U...

by blackjimmy - Python文档中心 - 2007-03-29 21:24:06 阅读(1454) 回复(0)

我的系统为Fedora,用yum已安装了perl-bioperl-1.5.2_102-13.fc10.noarch,但程序里用到“use bio::EnsEMBL::Registry;”,一运行就停在这一行报错“BEGIN failed--compilation aborted at .......”。 请问还应怎么添加这个模块: bio::EnsEMBL::Registry. 请大家相助,非常感谢!

by bmechuangye - Perl - 2009-06-24 17:52:03 阅读(2982) 回复(6)

bio 是否不能支持多线程? openssl 不是很熟悉 我的代码 使用了bio, windows 下面我发现多线成有问题, linux 开始没发现,现在发现也回有问题 bio 到最后malloc 的时候 会导致 crash, 我无法确认原因是什么, 有熟悉的人吗?

by benjiam - C/C++ - 2009-03-18 11:19:55 阅读(1364) 回复(2)

bio *bio; SSL *ssl; SSL_CTX *ctx= SSL_CTX_new(SSLv2_client_method()); if(!SSL_CTX_load_verify_locations(ctx,"/usr/local/ssl/certs/vsftpd.pem",NULL)) { fprintf(stderr, "Error loading trust store\n"); ERR_print_errors_fp(stderr); SSL_CTX_free(ctx); } sprintf(host,"%s:%d",serv_host,serv_port); bio=bio_...

by greatho1507 - C/C++ - 2008-09-25 17:15:39 阅读(1772) 回复(5)

之前bio_gets还是可以正常接受的.后来就不行了,直接返回0. 调用bio_puts,对方可以正常收到. tcpdump看出有数据包传进来. 怎么回事呢?

by iterator - C/C++ - 2007-10-18 17:04:07 阅读(1855) 回复(0)

上网查资料,这方面的资料基本等于没有。一点头绪都没有,有谁做过,指点指点吧。。。

by 我learnc - C/C++ - 2007-09-17 16:44:39 阅读(2099) 回复(4)